Bacteriology
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Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction. Anu Raghunathan, Jennifer Reed, Sookil Shin, Bernhard Palsson and Simon Daefler. BMC Systems Biology 2009, 3:38 doi:10.1186/1752-0509-3-38
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Cancer Research
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Glucocorticoid receptor knock down reveals a similar apoptotic threshold but differing gene regulation patterns in T-cell and pre-B-cell acute lymphoblastic leukemia by Schwartz et. al. Molecular and Cellular Endocrinology: Volume 320, Issues 1-2, 14 May 2010, Pages 76-86
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Gene expression-signature of belinostat in cell lines is specific for histone deacetylase inhibitor treatment, with a corresponding signature in xenografts. Anne Monks et al. Anti-Cancer Drugs: September 2009 -Volume 20 -Issue 8 -pp 682-692
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Effect of Ganoderma on drug-sensitive and multidrug-resistant small-cell lung carcinoma cells. D. Sadava, D. Still, R. Mudry, S. Kane. Cancer Letters 2009, Volume 277, Issue 2, Pages 182-189
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Analytical validation of the GeXP analyzer and design of a workflow for cancer-biomarker discovery using multiplexed gene-expression profiling. Alex J. Rai, RashmiM. Kamath, William Gerald & Martin Fleisher. Anal BioanalChemEpub2008. DOI 10.1007/s00216-008-2436-7.
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Diagnosis of the Small Round Blue Cell Tumors Using Multiplex Polymerase Chain Reaction. Qing-Rong Chen, et al. Journal of Molecular Diagnostics 2007, Vol. 9, No. 1
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Copy Number Variation and Allele Burden Analysis
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JAK2V617F allele burden discriminates essential thrombocythemia from a subset of prefibrotic-stage primary myelofibrosis. Kais Hussein et al. Experimental Hematology2009;37:1186–1193
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Identification and characterisation of a large Senataxin (SETX) gene duplication in ataxia with ocular apraxia type 2 (AOA2). Larissa Arning, Ludger Schöls, Huriye Cin, Manfred Souquet, Jörg T. Epplen & Dagmar Timmann. Neurogenetics2008, DOI 10.1007/s10048-008-0139-z
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Neuroscience
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Abnormal iron metabolism and oxidative stress in mice expressing a mutant form of the ferritin light polypeptide gene. Ana G. Barbeito et al. J Neurochem. 2009; 109(4): 1067–1078.
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Plant Biology
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Genetic Variation for Lettuce Seed Thermoinhibition Is Associated with Temperature-sensitive Expression of Abscisic Acid, Gibberellin and Ethylene Biosynthesis, Metabolism and Response Genes. Jason Argyris, Peetambar Dahal, Eiji Hayashi, David W. Still and Kent J. Bradford. Plant Physiology, 2008; 10.1104. pp.108.125807
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Involvement of the MADS-Box Gene ZMM4 in Floral Induction and Inflorescence Development in Maize1[W][OA]. Olga N. Danilevskaya, Xin Meng, David A. Selinger, Stephane Deschamps, Pedro Hermon, Gordon Vansant, Rajeev Gupta, Evgueni V. Ananiev, and Michael G. Muszynski. Plant Physiology 2008, Volume 147. pp. 2054–2069
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Highly Specific Gene Silencing by Artificial miRNAs in Rice. Warthmann N, Chen H, Ossowski S, Weigel D & P Herve. PLoS ONE 2008, 3(3): e1829.
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Veinal Necrosis Induced by Turnip mosaic virus Infection in Arabidopsis Is a Form of Defense Response Accompanying HR-Like Cell Death. Bomin Kim, Chikara Masuta, Hideyuki Matsuura, Hideki Takahashi & Tsuyoshi Inukai. MPMI 2008, Vol. 21, No. 2, pp. 260–268.
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FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis. Youxi Yuan, Huilan Wu, Ning Wang, Jie Li, Weina Zhao, Juan Du, Daowen Wang, and Hong-Qing Ling. Cell Research, 2008 Feb; Volume: Online Publication Pages: 1-13.
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Stem Cells
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Obtaining Pluripotency Biomarker Signatures, Multiplex Gene-Expression Assay for Human Induced Pluripotent Stem Cells. Kathryn Sciabica, Ph.D., Knut Woltjen, Ph.D., Akitsu Hotta, Ph.D.
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Toxicology and Pharmaceutical Research
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Nigellasativathymoquinone-rich fraction greatly improves plasma antioxidant capacity and expression of antioxidant genes in hypercholesterolemicrats. MaznahIsmail, GhanyaAl-Naqeepaand Kim Wei Chan. Free Radical Biology and Medicine. doi:10.1016/j.freeradbiomed.2009.12.002
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Two duplicated P450 genes are associated with pyrethroid resistance in Anopheles funestus, a major malaria vector. Wondji et al. Genome Res. 2009 19: 452-459.
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Field-Caught Permethrin-Resistant Anopheles gambiaeOverexpressCYP6P3, a P450 That Metabolises Pyrethroids. Muller P, WarrE, Stevenson BJ, Pignatelli PM, Morgan JC, et al. PLoS Genet 2008, 4(11): e1000286. doi:10.1371/journal.pgen.1000286.
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B lymphocyte–directed immunotherapy promotes long-term islet allograft survival in nonhuman primates. Chengyang Liu, et al. Nature Medicine 2007, Vol. 13, No. 11
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Gene Expression Analysis of Troglitazone Reveals Its Impact on Multiple Pathways in Cell Culture: A Case for In Vitro Platforms Combined with Gene Expression Analysis for Early (Idiosyncratic) Toxicity Screening. Gordon Vansent et al. International Journal of Toxicology 2007, Vol. 25, pp.85–94.
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Virology
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Rapid and sensitive detection of 68 unique varicella zoster virus gene transcripts in five multiplex reverse transcription-polymerase chain reactions. Nagel, M.A., et al., J. Virol. Methods 2009, doi:10.1016/j.jviromet.2008.11.019
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Protection against simian/human immunodeficiency virus (SHIV) 89.6P in macaques after coimmunization with SHIV antigen and IL-15 plasmid. Jean D. Boyer et al. PNAS 2007, Vol. 104, No. 47 pp. 18648–18653
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